I actually just went through the process of going from a Windows master server to a 5230 appliance (SUSE Linux). I'm actually typing this reply as I sit in a WebEx session with Symantec and the professional service we used as there are a few leftover issues.
I will say this, if I were to warn you of anything, it would be to go ahead and restore any catalog archives you made before migrating. This has been the biggest headache so far. I really wanted to do this before we started but for several reasons outside of my control that could not happen.
Joe