the make_catalog_backup script would need to be changed to have a different working directory (at least with my version of bacula). I made that change myself some time back (I also like to keep the bacula.sql file around--so I didn't change delete_catalog_backup). Alas, since I install from fedora RPMs, my local changes have recently been lost due to an updated RPM--however, as I recall, the only change is the wd variable in the script (my perl is weak enough that I was happy that I was able to figure out even that triviality).
-se
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