configure.pl --batch --config-path /etc/backuppc/config.pl worked for me. Where 
configure.pl is config script from 3.3.0 package.
Due to some bug, it's a must to change "my $useFHS = 1" in Lib.pm file.

>If I just backup the directory and then do a apt-get install backuppc, would 
>that work? 
>What are the actual steps if you dont mind?

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